Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAAAAGCGTTCCGTCTGCGATTGTCAGCTGCC
..(((((((((((((((((((&))))................)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015325
GeneSymbolICE1
Binding site6962,6999
Score0.923
Seed1
Au0.426
Energy-22.0
Binding len37
Me-4.957
Phylopstem0.9456654688888888
Phylopflank1.0281933665
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure