Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCACAAGCAGCTGCC
..((((((((..((((..(((&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015325
GeneSymbolICE1
Binding site4193,4211
Score0.846
Seed1
Au0.441
Energy-20.3
Binding len18
Me-11.129
Phylopstem-1.284181375
Phylopflank-0.7756864975
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure