Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGATGGGGGGGTAGGGGTCC
.((((((...(((((((((((&)).))))))))).)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_015330
GeneSymbolSPECC1L
Binding site5749,5769
Score0.904
Seed1
Au0.338
Energy-26.8
Binding len20
Me-8.406
Phylopstem-0.9346720833333332
Phylopflank-0.19707001249999997
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end8
Position3UTR
2D Structure