Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTCCCATCCTCTGTGCCAGGTG
((((((((((............&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015332
GeneSymbolNUDCD3
Binding site2141,2165
Score0.923
Seed1
Au0.426
Energy-17.2
Binding len12
Me-13.224
Phylopstem-0.6691328000000001
Phylopflank-0.22427144262500004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure