Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATCCTCGGCTGCC
..(((((((.((..(((((((&))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015332
GeneSymbolNUDCD3
Binding site1185,1203
Score1.0
Seed1
Au0.353
Energy-22.2
Binding len18
Me-8.345
Phylopstem0.1732005
Phylopflank-0.09667931250000003
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure