Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGGGGCGGCCGAGCTGTAT
.(((((((.(((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015332
GeneSymbolNUDCD3
Binding site64,85
Score0.846
Seed1
Au0.338
Energy-21.2
Binding len16
Me-4.85
Phylopstem0.08087667142857143
Phylopflank0.274010207125
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure