Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACAAATGTCAGCTAGTT
..(((((((((.(((((((((&))))))))).)).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015336
GeneSymbolZDHHC17
Binding site3889,3911
Score0.846
Seed1
Au0.721
Energy-17.3
Binding len22
Me-8.304
Phylopstem2.0043694444444444
Phylopflank1.8756991499999995
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure