Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTCCAGCCAGGA
.((((((....(((((((....&)))))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015341
GeneSymbolNCAPH
Binding site4107,4124
Score0.923
Seed1
Au0.529
Energy-18.6
Binding len17
Me-11.231
Phylopstem0.029575857142857136
Phylopflank0.03200011500000001
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure