Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGTGGGAAACCCAGCTGCAGA
(((((((((.((((.......&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015343
GeneSymbolCTDNEP1
Binding site33,54
Score1.0
Seed1
Au0.382
Energy-20.6
Binding len15
Me-6.149
Phylopstem-0.1771031111111111
Phylopflank0.7590143103214284
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure