Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCCTCACCGCGGCTCGCT
..(((((((((((.(..((((&))))..)...))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354046
GeneSymbolARHGEF7
Binding site3949,3972
Score0.846
Seed1
Au0.324
Energy-23.4
Binding len23
Me-6.047
Phylopstem-0.0162562
Phylopflank-0.51988368875
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure