Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCTATGTTGTTCTTGATGCCATGGTT
(((((((((((((((((((((.&)))))))))))).....)))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015350
GeneSymbolLRRC8B
Binding site5831,5859
Score0.846
Seed1
Au0.706
Energy-21.4
Binding len28
Me-3.938
Phylopstem0.07212604074074074
Phylopflank0.0736802875000001
Longest consecutive pairings12
Position of longest consecutive pairings16
Pairings in 3prime end7
Position3UTR
2D Structure