Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTTGTTTACATGAGTGTGCTGGGG
.((((((((((.((((((((..&.))))))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015351
GeneSymbolTTC9
Binding site3495,3523
Score1.0
Seed1
Au0.5
Energy-22.9
Binding len22
Me-7.14
Phylopstem-0.18879521999999999
Phylopflank0.09878843499999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure