Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTGCCTATGCCAGA
..((((((((....((((((((&)))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015352
GeneSymbolPOFUT1
Binding site3649,3667
Score0.846
Seed1
Au0.485
Energy-19.1
Binding len18
Me-13.275
Phylopstem0.1256930375
Phylopflank-0.2079448525
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure