Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAGGGACCCGGCTGTG
..(((((((.((((.((((((&))))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015354
GeneSymbolNUP188
Binding site5026,5046
Score0.923
Seed1
Au0.382
Energy-22.8
Binding len20
Me-6.935
Phylopstem3.3924935714285707
Phylopflank5.55908829625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure