Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGGATGTGGAGCTGTC
..((((((.(((((.((((((&)))))).))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015354
GeneSymbolNUP188
Binding site2875,2896
Score0.846
Seed1
Au0.485
Energy-20.3
Binding len21
Me-6.749
Phylopstem2.8757170000000003
Phylopflank4.22687470875
Longest consecutive pairings6
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure