Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTAAACAAGGTCAGCCAGGTA
(((((((..((..(((......&.)))..))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015365
GeneSymbolAMMECR1
Binding site4111,4134
Score0.846
Seed1
Au0.574
Energy-16.8
Binding len18
Me-11.944
Phylopstem1.5990351428571432
Phylopflank2.7932151299999997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure