Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCCACTGTGGCTGCAT
.(((((((((((.((..((((&))))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015368
GeneSymbolPANX1
Binding site770,790
Score1.0
Seed1
Au0.471
Energy-23.3
Binding len20
Me-5.316
Phylopstem3.3884352727272726
Phylopflank2.9984719175000003
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure