Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGGGACCCCCAAGAGGTACAGCCTGGAGCTGGGC
.(.(((((.((((((((....&.))))))).).))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015370
GeneSymbolC22orf31
Binding site720,759
Score0.923
Seed0
Au0.412
Energy-19.5
Binding len19
Me-6.407
Phylopstem1.6704555555555554
Phylopflank1.098750015
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure