Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGCAGGCGGAACCAGCAGTTGGAGG
((.((((((((((((((((((&))))).)))......))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015373
GeneSymbolCBY1
Binding site377,407
Score0.846
Seed0
Au0.441
Energy-19.8
Binding len30
Me-5.495
Phylopstem5.323138884615383
Phylopflank3.419695765
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure