Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTATCATGCCAGGG
.((((((((.....((((....&))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015378
GeneSymbolVPS13D
Binding site9402,9419
Score0.923
Seed1
Au0.456
Energy-18.5
Binding len17
Me-13.353
Phylopstem5.154584125
Phylopflank4.8542011975
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure