Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTTGTTGGCTGCTGGGG
.(((((((..(((((.(((...&))).)))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015382
GeneSymbolHECTD1
Binding site5356,5375
Score0.846
Seed1
Au0.485
Energy-16.8
Binding len19
Me-6.325
Phylopstem6.583630714285715
Phylopflank5.746568898749999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure