Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCACTCTGCTATGGCTGTGGT
((((((((((((.((((((((&))))))))..))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015382
GeneSymbolHECTD1
Binding site1282,1308
Score1.0
Seed1
Au0.529
Energy-23.0
Binding len26
Me-5.227
Phylopstem6.359457333333333
Phylopflank5.61501623125
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure