Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGTGCAGCTGCAT
.((((((((((..(((.....&))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015385
GeneSymbolSORBS1
Binding site3445,3460
Score1.0
Seed1
Au0.618
Energy-20.2
Binding len15
Me-8.429
Phylopstem4.69915025
Phylopflank3.9671616325000008
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure