Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCGCCTGTAGCTGCC
..((((((((((.((((....&)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015386
GeneSymbolCOG4
Binding site2370,2386
Score0.923
Seed1
Au0.441
Energy-20.8
Binding len16
Me-6.246
Phylopstem4.8533919
Phylopflank5.017600455
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure