Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAACCTGGCTGA
...((((((.((((((.((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015386
GeneSymbolCOG4
Binding site323,340
Score0.923
Seed0
Au0.485
Energy-20.2
Binding len17
Me-7.757
Phylopstem0.3563205
Phylopflank0.03204611750000001
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure