Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCGGGGAGGAAGAGCTCCGCGGATTGGGTTACGTCGCCGGA
..((((((((((((((((.((.&))))))))))))).........................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001354080
GeneSymbolPSME3IP1
Binding site17,61
Score0.923
Seed1
Au0.382
Energy-23.8
Binding len44
Me-4.957
Phylopstem0.2430066390243902
Phylopflank0.14882373444444444
Longest consecutive pairings13
Position of longest consecutive pairings31
Pairings in 3prime end6
Position5UTR
2D Structure