Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGTAGTGAAATGGAGCCC
....((((((..(((((((...&))))))).........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001354080
GeneSymbolPSME3IP1
Binding site1690,1713
Score0.923
Seed0
Au0.471
Energy-20.8
Binding len23
Me-15.718
Phylopstem0.12595199999999998
Phylopflank0.7243693237500004
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure