Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACCTTTGTGCCAGGA
.(((((((((............&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015392
GeneSymbolNPDC1
Binding site1324,1339
Score0.846
Seed1
Au0.353
Energy-15.9
Binding len11
Me-13.079
Phylopstem-0.2943706
Phylopflank0.20811753500000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure