Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGCTCGGAGGCGCTCTTGGGCCAGCGGCTGCGGCTGCAGG
((((((((((((((((..(((&.))).)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015401
GeneSymbolHDAC7
Binding site900,944
Score0.846
Seed1
Au0.279
Energy-29.9
Binding len22
Me-3.938
Phylopstem0.16408656875
Phylopflank0.03369762375000007
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure