Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGCACACCCCACTGCCGCAGCTGCC
..(((((((((((.((..(((&.)))..)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015409
GeneSymbolEP400
Binding site1774,1803
Score0.923
Seed1
Au0.279
Energy-28.0
Binding len21
Me-5.814
Phylopstem4.166598181818181
Phylopflank3.393462955000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure