Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCCGGGGCAGCAGGTGAGGAAGCCGCCGTACTGCAAA
((((((.((((((.((.....&.)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015414
GeneSymbolRPL36
Binding site711,752
Score0.923
Seed0
Au0.515
Energy-18.7
Binding len17
Me-6.338
Phylopstem0.225179
Phylopflank-0.7174614724999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure