Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATTTAAAGTGTGAACTTAATATATAAGATGCCAGGA
.((((((((...(((((.....&.)))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015423
GeneSymbolAASDHPPT
Binding site2388,2425
Score0.923
Seed1
Au0.75
Energy-16.9
Binding len18
Me-11.207
Phylopstem0.9498992675
Phylopflank0.711832406
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure