Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGTGCTTGCTGCTGAACCTGAGCTGCAAG
((((((((..((((....(((&.)))....))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015423
GeneSymbolAASDHPPT
Binding site394,425
Score0.846
Seed1
Au0.588
Energy-20.8
Binding len23
Me-7.205
Phylopstem4.0595994625
Phylopflank4.833679656250001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure