Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTGTGTGCCGGC
..((((((((((((........&)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015425
GeneSymbolPOLR1A
Binding site1718,1731
Score0.923
Seed1
Au0.456
Energy-17.8
Binding len13
Me-5.925
Phylopstem-0.3561807333333334
Phylopflank-0.2670703200000001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure