Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCCTTGTGGTCGGGA
.((((((.(((((.((((....&)))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015425
GeneSymbolPOLR1A
Binding site5203,5220
Score0.923
Seed1
Au0.368
Energy-17.8
Binding len17
Me-6.964
Phylopstem-0.9827561666666665
Phylopflank-0.3439910812500001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure