Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAGGATGTTGATCTCCAAGAACATGCCCTGGCGGCGGCTGCAGG
((((((((((.((((...(((&.))).)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015425
GeneSymbolPOLR1A
Binding site101,150
Score0.923
Seed1
Au0.441
Energy-23.4
Binding len21
Me-6.995
Phylopstem-0.09358419999999998
Phylopflank0.04009655375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure