Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCCAGCTGGCTGCAC
.(((((((((((..(((((((&))))))))).)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015425
GeneSymbolPOLR1A
Binding site11132,11153
Score0.846
Seed1
Au0.441
Energy-23.2
Binding len21
Me-5.939
Phylopstem3.905386338461539
Phylopflank5.047819137499999
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure