Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCTGCAGCTGA
...((((((((((...(((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015425
GeneSymbolPOLR1A
Binding site3689,3705
Score1.0
Seed0
Au0.397
Energy-22.2
Binding len16
Me-8.34
Phylopstem0.0173254
Phylopflank8.764125000000622e-05
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure