Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCGCAGCTGCC
..(((((((((((.((.....&)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015426
GeneSymbolPOC1A
Binding site15,30
Score0.923
Seed1
Au0.22
Energy-24.7
Binding len15
Me-5.814
Phylopstem0.14733499999999997
Phylopflank0.41062117000000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure