Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCAAGCAGAAACTGCAGA
((((((((((.((((.(((((&)))))))))..))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015430
GeneSymbolPAMR1
Binding site1213,1238
Score0.846
Seed1
Au0.426
Energy-21.9
Binding len25
Me-6.995
Phylopstem5.263976923076924
Phylopflank3.054938774999999
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure