Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCGCGGCA
.....((((((((((......&)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015430
GeneSymbolPAMR1
Binding site17,28
Score0.846
Seed0
Au0.351
Energy-19.2
Binding len11
Me-13.899
Phylopstem1.3245392
Phylopflank0.958056525
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure