Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAAACGGAGCTGCGGA
((((((((.((..(((.....&)))..)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015439
GeneSymbolCCDC28A
Binding site4,21
Score0.846
Seed1
Au0.34
Energy-19.5
Binding len17
Me-9.63
Phylopstem0.119600125
Phylopflank1.4125247612500003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure