Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCAGCAGATGTTGCTACTCCTAAGATGCCAGGG
.((((((((.....((((....&.)))).......)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015446
GeneSymbolAHCTF1
Binding site5331,5365
Score0.923
Seed1
Au0.5
Energy-18.6
Binding len21
Me-13.353
Phylopstem4.744135
Phylopflank2.6452487425
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure