Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCTAGCCCAGCTGACGGA
(((((((((.((((((((((.&)))))..))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015446
GeneSymbolAHCTF1
Binding site6725,6748
Score0.833
Seed1
Au0.5
Energy-20.5
Binding len23
Me-5.18
Phylopstem3.165573333333333
Phylopflank4.1388822675000005
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure