Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTTCCCGTTGTATCCAGA
..((((.((((((((..(((((&)))))..)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015449
GeneSymbolC1orf43
Binding site959,979
Score0.846
Seed0
Au0.544
Energy-15.7
Binding len20
Me-6.734
Phylopstem2.8145589875
Phylopflank3.7195949862499993
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure