Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCCAGTCAGTTGCAAT
((((((((((((((.......&)))).).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015449
GeneSymbolC1orf43
Binding site872,889
Score0.846
Seed1
Au0.426
Energy-16.6
Binding len17
Me-4.906
Phylopstem5.063835750000001
Phylopflank3.7397118562499996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure