Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCAGGCCCAGACTGTAT
.((((((((.((((((..(((&)))..)))).))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015449
GeneSymbolC1orf43
Binding site931,953
Score0.846
Seed1
Au0.426
Energy-18.1
Binding len22
Me-5.036
Phylopstem2.7879587666666668
Phylopflank3.3018907100000003
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure