Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTTGACACCACAGTTGCAGA
(((((((((.((.(((.....&.))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015450
GeneSymbolPOT1
Binding site2312,2335
Score1.0
Seed1
Au0.676
Energy-18.7
Binding len17
Me-6.469
Phylopstem1.5925331111111114
Phylopflank2.0119398137499998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure