Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTGGAGCCTCTGGCTGCAAT
(((((((((.((((.((((((&)))))).))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015453
GeneSymbolTHUMPD3
Binding site3144,3167
Score0.923
Seed1
Au0.662
Energy-20.9
Binding len23
Me-5.916
Phylopstem0.34777377777777774
Phylopflank0.07479736875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure