Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCCATTACTGACACCCAAAGATGAAGTACAGCTGA
...((((((.(((((((((((&))))))))))).........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015457
GeneSymbolZDHHC5
Binding site3100,3143
Score0.923
Seed0
Au0.5
Energy-22.8
Binding len43
Me-7.757
Phylopstem3.6689248181818184
Phylopflank2.61064540125
Longest consecutive pairings11
Position of longest consecutive pairings32
Pairings in 3prime end8
PositionCDS
2D Structure